SympSnip:

example 0.0.1

We look at the example of M=S2×S1. Observe that S2=D2S1D2, so we can write M=D2×S1Σ1D2×S1. The Heegaard diagram (Σ1,α,β) consists of a torus with two meridional cycles.
figure 0.0.2:A non-admissible Heegaard diagram
If the diagram is chosen so that α,β are disjoint, then the Lagrangian intersection Floer cohomology HF(α,β) vanishes.
figure 0.0.3:An admissible Heegaard diagram
However, if the diagram is chosen so that α,β intersect transversely, the Lagrangian intersection Floer cohomology (with Z/2Z coefficients) is Z/2ZZ/2Z. Note that β can be chosen so that it is Hamiltonian isotopic to β. The discrepancy between these two answers comes from the non-convergence of the homotopy between the composition of continuation maps fg:CF(α,β)CF(α,β)CF(α,β) id:CF(α,β)CF(α,β) over Z/2Z coefficients. The presence of an annulus between α,β is the culprit for the non-convergence. One can make the quantities converge by using Novikov coefficients instead of Z/2Z coefficients. In that setting, the differential in figure 0.0.2 will be exact unless the areas of the two strips agree --- that is, the Lagrangians α,β are Hamiltonian isotopic.